Itamar Simon: search on Z-Library

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1

DNA methylation and gene expression

Zahava Siegfried, Itamar Simon

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Year:

2010

Language:

english

File:

PDF, 180 KB

english, 2010

2

10.1038/44866

Cedar, Howard, Simon, Itamar, Tenzen, Toyoaki, Reubinoff, Benjamin E., Hillman, Dahlia, McCarrey, John R.

Journal:

Year:

1999

Language:

english

File:

PDF, 186 KB

english, 1999

3

Does osmoregulatory behaviour in entomopathogenic nematodes predispose desiccation tolerance?

Piggott, Simon, Wright, Denis, Glazer, Itamar, Liu, Qhi-Zhi

Journal:

Year:

2002

Language:

english

File:

PDF, 144 KB

english, 2002

4

Studying and modelling dynamic biological processes using time-series gene expression data

Bar-Joseph, Ziv, Gitter, Anthony, Simon, Itamar

Journal:

Nature Reviews Genetics

Year:

2012

Language:

english

File:

PDF, 656 KB

english, 2012

5

Modulation of the Vitamin D3 Response by Cancer-Associated Mutant p53

Perry Stambolsky, Yuval Tabach, Giulia Fontemaggi, Lilach Weisz, Revital Maor-Aloni, Zahava Siegfried, Idit Shiff, Ira Kogan, Moshe Shay, Eyal Kalo, Giovanni Blandino, Itamar Simon, Moshe Oren, Varda

Journal:

Year:

2010

Language:

english

File:

PDF, 37 KB

english, 2010

6

Reconstructing dynamic regulatory maps

Ernst, Jason, Vainas, Oded, Harbison, Christopher T, Simon, Itamar, Bar-Joseph, Ziv

Journal:

Molecular Systems Biology

Year:

2007

Language:

english

File:

PDF, 404 KB

english, 2007

7

Distinguishing between stochasticity and determinism: Examples from cell cycle duration variability

Pearl Mizrahi, Sivan, Sandler, Oded, Lande-Diner, Laura, Balaban, Nathalie Q., Simon, Itamar

Journal:

Year:

2016

Language:

english

File:

PDF, 541 KB

english, 2016

8

An analysis of intra array repeats: the good, the bad and the non informative

Yedid Elbez, Shlomit Farkash-Amar, Itamar Simon

Journal:

Year:

2006

Language:

english

File:

PDF, 393 KB

english, 2006

9

Allelic inactivation regulates olfactory receptor gene expression

Andrew Chess, Itamar Simon, Howard Cedar, Richard Axel

Journal:

Year:

1994

Language:

english

File:

PDF, 5.91 MB

english, 1994

10

Consórcio sorgo e braquiária na entrelinha para produção de grãos, forragem e palhada na entressafra

Silva, Alessandro Guerra da, Moraes, Luiz Eduardo de, Horvathy Neto, Adalbert, Teixeira, Itamar Rosa, Simon, Gustavo André

Journal:

Year:

2014

File:

PDF, 116 KB

2014

11

MILANO – custom annotation of microarray results using automatic literature searches

Ran Rubinstein, Itamar Simon

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 561 KB

english, 2005

12

Program-Specific Distribution of a Transcription Factor Dependent on Partner Transcription Factor and MAPK Signaling

Julia Zeitlinger, Itamar Simon, Christopher T. Harbison, Nancy M. Hannett, Thomas L. Volkert, Gerald R. Fink, Richard A. Young

Journal:

Year:

2003

Language:

english

File:

PDF, 409 KB

english, 2003

13

Deterministic Versus Stochastic Variability in the Mammalian Cell Cycle

Pearl, Sivan, Sandler, Oded, Agam, Oded, Simon, Itamar, Balaban, Nathalie Q.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 38 KB

english, 2014

14

The p53 C Terminus Controls Site-Specific DNA Binding and Promotes Structural Changes within the Central DNA Binding Domain

Laptenko, Oleg, Shiff, Idit, Freed-Pastor, Will, Zupnick, Andrew, Mattia, Melissa, Freulich, Ella, Shamir, Inbal, Kadouri, Noam, Kahan, Tamar, Manfredi, James, Simon, Itamar, Prives, Carol

Journal:

Year:

2015

Language:

english

File:

PDF, 4.08 MB

english, 2015

15

Seeding density of Brachiaria ruziziensis intercropped with grain sorghum and effects on soybean in succession

Larissa, Pacheco Borges, Alessandro, Guerra da Silva, Mirmes, Paiva Goulart, Itamar, Rosa Teixeira, Gustavo, Andre Simon, Katia, Aparecida de Pinho Costa

Journal:

African Journal of Agricultural Research

Year:

2016

Language:

english

File:

PDF, 482 KB

english, 2016

16

Characterizing T Cells in SCID Patients Presenting with Reactive or Residual T Lymphocytes

Lev, Atar, Simon, Amos J., Trakhtenbrot, Luba, Goldstein, Itamar, Nagar, Meital, Stepensky, Polina, Rechavi, Gideon, Amariglio, Ninette, Somech, Raz

Journal:

Clinical & Developmental Immunology

Year:

2012

Language:

english

File:

PDF, 1.08 MB

english, 2012

17

Perturbations in the Replication Program Contribute to Genomic Instability in Cancer

Blumenfeld, Britny, Ben-Zimra, Micha, Simon, Itamar

Journal:

International Journal of Molecular Sciences

Year:

2017

Language:

english

File:

PDF, 646 KB

english, 2017

18

Genome-wide analysis of the replication program in mammals

Shlomit Farkash-Amar, Itamar Simon

Journal:

Chromosome Research

Year:

2010

Language:

english

File:

PDF, 274 KB

english, 2010

19

Comparative Analysis of DNA Replication Timing Reveals Conserved Large-Scale Chromosomal Architecture

Yaffe, Eitan, Farkash-Amar, Shlomit, Polten, Andreas, Yakhini, Zohar, Tanay, Amos, Simon, Itamar, Bickmore, Wendy A.

Journal:

Year:

2010

Language:

english

File:

PDF, 1.01 MB

english, 2010

20

Continuous Representations of Time-Series Gene Expression Data

Bar-Joseph, Ziv, Gerber, Georg K., Gifford, David K., Jaakkola, Tommi S., Simon, Itamar

Journal:

Journal of Computational Biology

Year:

2003

Language:

english

File:

PDF, 297 KB

english, 2003

21

Synovial VLA-1+ T cells display an oligoclonal and partly distinct repertoire in rheumatoid and psoriatic arthritis

Itamar Goldstein, Amos J. Simon, Shomron Ben Horin, Sarit Matzri, Alexander Koltakov, Pnina Langevitz, Gideon Rechavi, Ninette Amariglio, Ilan Bank

Journal:

Clinical Immunology

Year:

2008

Language:

english

File:

PDF, 1.06 MB

english, 2008

22

Developmental programming of CpG island methylation profiles in the human genome

Straussman, Ravid, Nejman, Deborah, Roberts, Douglas, Steinfeld, Israel, Blum, Barak, Benvenisty, Nissim, Simon, Itamar, Yakhini, Zohar, Cedar, Howard

Journal:

Nature Structural and Molecular Biology

Year:

2009

Language:

english

File:

PDF, 760 KB

english, 2009

23

Combination of genomic approaches with functional genetic experiments reveals two modes of repression of yeast middle-phase meiosis genes

Michael Klutstein, Zahava Siegfried, Ariel Gispan, Shlomit Farkash-Amar, Guy Zinman, Ziv Bar-Joseph, Giora Simchen, Itamar Simon

Journal:

Year:

2010

Language:

english

File:

PDF, 1.19 MB

english, 2010

24

Reduced central tolerance in Omenn syndrome leads to immature self-reactive oligoclonal T cells

Somech, Raz, Simon, Amos J., Lev, Atar, Dalal, Ilan, Spirer, Zvi, Goldstein, Itamar, Nagar, Meital, Amariglio, Ninette, Rechavi, Gideon, Roifman, Chaim M.

Journal:

Journal of Allergy and Clinical Immunology

Year:

2009

Language:

english

File:

PDF, 743 KB

english, 2009

25

Carcinoma of the large bowel after a single massive dose of radiation in healthy teenagers

Siegfried Rotmensch, Itamar Avigad, Edy E. Soffer, Ada Horowitz, Simon Bar-Meir, Ronit Confino, Abraham Czerniak, Isidor Wolfstein

Journal:

Year:

1986

Language:

english

File:

PDF, 513 KB

english, 1986

26

The Genome-Wide Localization of Rsc9, a Component of the RSC Chromatin-Remodeling Complex, Changes in Response to Stress

Marc Damelin, Itamar Simon, Terence I. Moy, Boris Wilson, Suzanne Komili, Paul Tempst, Frederick P. Roth, Richard A. Young, Bradley R. Cairns, Pamela A. Silver

Journal:

Year:

2002

Language:

english

File:

PDF, 515 KB

english, 2002

27

[ACM Press the sixth annual international conference - Washington, DC, USA (2002.04.18-2002.04.21)] Proceedings of the sixth annual international conference on Computational biology - RECOMB '02 - A new approach to analyzing gene expression time series data

Bar-Joseph, Ziv, Gerber, Georg, Gifford, David K., Jaakkola, Tommi S., Simon, Itamar

Year:

2002

Language:

english

File:

PDF, 1.61 MB

english, 2002

28

Direct and indirect mechanisms of KLK4 inhibition revealed by structure and dynamics

Riley, Blake T., Ilyichova, Olga, Costa, Mauricio G. S., Porebski, Benjamin T., de Veer, Simon J., Swedberg, Joakim E., Kass, Itamar, Harris, Jonathan M., Hoke, David E., Buckle, Ashley M.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.56 MB

english, 2016

29

Combined analysis reveals a core set of cycling genes

Yong Lu, Shaun Mahony, Panayiotis V Benos, Roni Rosenfeld, Itamar Simon…

Journal:

Year:

2007

Language:

english

File:

PDF, 454 KB

english, 2007

30

Genome-wide Determination of Mammalian Replication Timing by DNA Content Measurement

Yehuda, Yishai, Blumenfeld, Britny, Lehmann, Dan, Simon, Itamar

Journal:

Journal of Visualized Experiments

Year:

2017

Language:

english

File:

PDF, 698 KB

english, 2017

31

Persistence to Anti-Cancer Treatments in the Stationary to Proliferating Transition

Pearl Mizrahi, Sivan, Gefen, Orit, Simon, Itamar, Balaban, Nathalie Q.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.29 MB

english, 2016

32

Molecular Characteristics of Liver Metastases from Uveal Melanoma

Meir, Tal, Dror, Rinat, Yu, Xueping, Qian, Jiang, Simon, Itamar, Pe’er, Jacob, Chowers, Itay

Journal:

Investigative Ophthalmology & Visual Science

Year:

2007

Language:

english

File:

PDF, 557 KB

english, 2007

33

Integrative Analysis of Methylome and Transcriptome Reveals the Importance of Unmethylated CpGs in Non-CpG Island Gene Activation

Marx, Amichai, Kahan, Tamar, Simon, Itamar

Journal:

BioMed Research International

Year:

2013

Language:

english

File:

PDF, 565 KB

english, 2013

34

Serial Regulation of Transcriptional Regulators in the Yeast Cell Cycle

Itamar Simon, John Barnett, Nancy Hannett, Christopher T Harbison, Nicola J Rinaldi, Thomas L Volkert, John J Wyrick, Julia Zeitlinger, David K Gifford, Tommi S Jaakkola, Richard A Young

Journal:

Year:

2001

Language:

english

File:

PDF, 419 KB

english, 2001

35

Backup in gene regulatory networks explains differences between binding and knockout results

Gitter, Anthony, Siegfried, Zehava, Klutstein, Michael, Fornes, Oriol, Oliva, Baldo, Simon, Itamar, Bar-Joseph, Ziv

Journal:

Molecular Systems Biology

Year:

2009

Language:

english

File:

PDF, 979 KB

english, 2009

36

The 2007 IEEE CEC simulated car racing competition

Julian Togelius, Simon Lucas, Ho Duc Thang, Jonathan M. Garibaldi, Tomoharu Nakashima, Chin Hiong Tan, Itamar Elhanany, Shay Berant, Philip Hingston, Robert M. MacCallum, Thomas Haferlach, Aravind Gow

Journal:

Genetic Programming and Evolvable Machines

Year:

2008

Language:

english

File:

PDF, 661 KB

english, 2008

37

Combined static and dynamic analysis for determining the quality of time-series expression profiles

Simon, Itamar, Siegfried, Zahava, Ernst, Jason, Bar-Joseph, Ziv

Journal:

Nature Biotechnology

Year:

2005

Language:

english

File:

PDF, 430 KB

english, 2005

38

The H+N2O→OH(2ΠΩ, v′, N′)+N2 reaction: the microscopic mechanism at 1.5 eV

Brouard, Mark, Burak, Itamar, Gatenby, Simon D.

Journal:

Physical Chemistry Chemical Physics

Year:

2000

Language:

english

File:

PDF, 212 KB

english, 2000

39

The mutation spectrum in genomic late replication domains shapes mammalian GC content

Kenigsberg, Ephraim, Yehuda, Yishai, Marjavaara, Lisette, Keszthelyi, Andrea, Chabes, Andrei, Tanay, Amos, Simon, Itamar

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 2.03 MB

english, 2016

40

The Delicate Relationship Between DNA Replication Timing And Gene Expression

Greenberg, Avraham, Blumenfeld, Britny, Simon, Itamar

Journal:

Current Opinion in Systems Biology

Year:

2020

File:

PDF, 1008 KB

2020

41

Competition between Small RNAs: A Quantitative View

Loinger, Adiel, Shemla, Yael, Simon, Itamar, Margalit, Hanah, Biham, Ofer

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 650 KB

english, 2012

42

A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors

Shi, Yanxin, Klutstein, Michael, Simon, Itamar, Mitchell, Tom, Bar-Joseph, Ziv

Journal:

Journal of Computational Biology

Year:

2009

Language:

english

File:

PDF, 411 KB

english, 2009

43

Higher-order association of extrachromosomal rDNA genes in Dictyostelium discoideum.

Itamar Simon, Donald E. Olins

Journal:

Cell Biology International

Year:

1994

File:

PDF, 323 KB

1994

44

Consórcio na entrelinha de sorgo com braquiária na safrinha para produção de grãos e forragem

Silva, Alessandro Guerra da, Moraes, Luiz Eduardo de, Horvathy Neto, Adalbert, Teixeira, Itamar Rosa, Simon, Gustavo André

Journal:

Semina Ciências Agrárias

Year:

2013

File:

PDF, 343 KB

2013

45

Modulation of the Vitamin D3 Response by Cancer-Associated Mutant p53

Perry Stambolsky, Yuval Tabach, Giulia Fontemaggi, Lilach Weisz, Revital Maor-Aloni, Zahava Sigfried, Idit Shiff, Ira Kogan, Moshe Shay, Eyal Kalo, Giovanni Blandino, Itamar Simon, Moshe Oren, Varda R

Journal:

Year:

2010

Language:

english

File:

PDF, 1.60 MB

english, 2010

46

Allele-specific expression patterns of interleukin-2 and Pax-5 revealed by a sensitive single-cell RT-PCR analysis

Kristina L. Rhoades, Nandita Singh, Itamar Simon, Barbara Glidden, Howard Cedar, Andrew Chess

Journal:

Current Biology

Year:

2000

Language:

english

File:

PDF, 117 KB

english, 2000

47

Study of mitotic chromatin supports a model of bookmarking by histone modifications and reveals nucleosome deposition patterns

Javasky, Elisheva, Shamir, Inbal, Gandhi, Shashi, Egri, Shawn, Sandler, Oded, Rothbart, Scott B., Kaplan, Noam, Jaffe, Jacob D, Goren, Alon, Simon, Itamar

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 12.81 MB

english, 2018

48

[ACM Press the sixth annual international conference - Washington, DC, USA (2002.04.18-2002.04.21)] Proceedings of the sixth annual international conference on Computational biology - RECOMB '02 - From promoter sequence to expression

Segal, Eran, Barash, Yoseph, Simon, Itamar, Friedman, Nir, Koller, Daphne

Year:

2002

Language:

english

File:

PDF, 3.07 MB

english, 2002

49

Lineage correlations of single cell division time as a probe of cell-cycle dynamics

Sandler, Oded, Mizrahi, Sivan Pearl, Weiss, Noga, Agam, Oded, Simon, Itamar, Balaban, Nathalie Q.

Journal:

Year:

2015

Language:

english

File:

PDF, 4.93 MB

english, 2015

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